BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020E12SP1|AL427638
(1038 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1431 2028 0.0
>3x_Contig1431
Length = 10954
Score = 2028 bits (1021), Expect = 0.0
Identities = 1029/1033 (99%)
Strand = Plus / Plus
Query: 1 actctaatctcggwttatttatcacagttgaacatagaatccgccgttttcgtctcagag 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1634 actctaatctcggatcatttatcacagttgaacatagaatccgccgttttcgtctcagag 1693
Query: 61 ttgttatttgcggaatgctcgaatctggacgaatcatctcaggaaagagcgcttgcgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1694 ttgttatttgcggaatgctcgaatctggacgaatcatctcaggaaagagcgcttgcgaat 1753
Query: 121 tacttttactctctatccctgtacttgaacaatgactttcatactgctatgcatgtttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1754 tacttttactctctatccctgtacttgaacaatgactttcatactgctatgcatgtttcc 1813
Query: 181 tctgaaagaagacatgataatcttgcatgtgcctacgtatactctcgatgttgtttgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1814 tctgaaagaagacatgataatcttgcatgtgcctacgtatactctcgatgttgtttgaaa 1873
Query: 241 ttgaagaagaattattcagacgctttggattgtctattatcattacagtcctgttgggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1874 ttgaagaagaattattcagacgctttggattgtctattatcattacagtcctgttgggac 1933
Query: 301 acctgtctatcccattttgggtatccgaagaaatcaacaatctgtctcttagtagggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1934 acctgtctatcccattttgggtatccgaagaaatcaacaatctgtctcttagtagggaag 1993
Query: 361 ttattcaaattattggatcacgaatctaagagtgaaactttcctcagatcttccttggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1994 ttattcaaattattggatcacgaatctaagagtgaaactttcctcagatcttccttggat 2053
Query: 421 gggaatccttatctctgggaagcgagcacagaactttgtgttcttcgttcaagtttggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2054 gggaatccttatctctgggaagcgagcacagaactttgtgttcttcgttcaagtttggtt 2113
Query: 481 cttacggtattcaaatcccagaagaatgcgcctacacgctcgcaatcatctgcagcaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 cttacggtattcaaatcccagaagaatgcgcctacacgctcgcaatcatctgcagcaatg 2173
Query: 541 atgacggtaccacctccaaactgtagtatggattccagatctaggaataagcctcaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2174 atgacggtaccacctccaaactgtagtatggattccagatctaggaataagcctcaaact 2233
Query: 601 ccatttaaagctccatccagaaacagacaaaacctttccaactcccaaactacatcctta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2234 ccatttaaagctccatccagaaacagacaaaacctttccaactcccaaactacatcctta 2293
Query: 661 ttatcggcttctaacgttggtgtatccatttctcctcatttctttaaaaaacacacaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2294 ttatcggcttctaacgttggtgtatccatttctcctcatttctttaaaaaacacacaagg 2353
Query: 721 tttactacaacaccaactactgcaacttcaagtgcaaatgtaaccactacaaacacatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2354 tttactacaacaccaactactgcaacttcaagtgcaaatgtaaccactacaaacacatct 2413
Query: 781 tctatcgatactaaacatctcggaactacaacaccatcgaaactgtcaggaacagattcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2414 tctatcgatactaaacatctcggaactacaacaccatcgaaactgtcaggaacagattcc 2473
Query: 841 caaaccaagttgttaaggtctcccatggataaaaaaattatgaccaacaactcatatcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2474 caaaccaagttgttaaggtctcccatggataaaaaaattatgaccaacaactcatatcag 2533
Query: 901 atgccaaacattagcacttttgactcaaatttggatgaacttttctccaacttcatccat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2534 atgccaaacattagcacttttgactcaaatttggatgaacttttctccaacttcatccat 2593
Query: 961 atagaatattgcaagtmaaggtatgattcattcaaagccatccgcatgatgcaaaatcgc 1020
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2594 atagaatattgcaagtcaaggtatgattcattcaaagccatccgcatgatgcaaaatcgc 2653
Query: 1021 actccactacaga 1033
| |||||||||||
Sbjct: 2654 attccactacaga 2666
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7908
Number of Sequences: 1807
Number of extensions: 7908
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 1038
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1022
effective length of database: 10,329,639
effective search space: 10556891058
effective search space used: 10556891058
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)